Build Issues on Mac 10.11.6

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Build Issues on Mac 10.11.6

Holland, Jason L. (AFRC-630)

Hi!

 

I’m having issues building HDF5 1.10.1 on OS X El Capitan Version 10.11.6, the homebrew version worked find with clang with my test application, but with the latest gcc and g++ I was having an issue that I was able to duplicate updating.  Somewhere on the internet it recommended rebuilding from scratch the hdf5 libraries

 

Here I’m trying to use gcc and g++ version 7.2.0:

$ gcc-7 --version

gcc-7 (Homebrew GCC 7.2.0) 7.2.0

Copyright (C) 2017 Free Software Foundation, Inc.

This is free software; see the source for copying conditions.  There is NO

warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

 

$ g++-7 --version

g++-7 (Homebrew GCC 7.2.0) 7.2.0

Copyright (C) 2017 Free Software Foundation, Inc.

This is free software; see the source for copying conditions.  There is NO

warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

 

$ echo $SHELL

/bin/bash

$ bash --version

GNU bash, version 3.2.57(1)-release (x86_64-apple-darwin15)

Copyright (C) 2007 Free Software Foundation, Inc.

 

$ CC="gcc-7" CXX="g++-7 -std=c++11" ../configure --prefix=/usr/local/hdf5 --enable-cxx

$ make -j 5

 

Making all in test

  CCLD     testhdf5

ld: warning: option -s is obsolete and being ignored

ld: warning: ignoring file ./.libs/libh5test.a, file was built for archive which is not the architecture being linked (x86_64): ./.libs/libh5test.a

Undefined symbols for architecture x86_64:

  "_AddTest", referenced from:

      _main in testhdf5.o

  "_GetTestCleanup", referenced from:

      _main in testhdf5.o

  "_GetTestExpress", referenced from:

      _size1_helper in tsohm.o

      _size2_helper in tsohm.o

  "_GetTestNumErrs", referenced from:

      _main in testhdf5.o

 

Any recommendations?

 

Thanks,

Jason

 

 

 


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